Chimpanzee
Pan troglodytes
 Mammal Chr 22: 8.5Mb Finished region
BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 1-2003
End: unspec.
GGSAC (Germany)
(URL)
BMBF (Germany) (URL)
Show Notes
Rat
Rattus norvegicus
 Mammal Chr 1, 10: 10Mb (selected QTLs) Other,
Partially Finished
BAC-based Shotgun (or other large clone) (4X) Finishing (10X)
Completed
Start: 2-2004
End: 12-2004
GGSAC (Germany)
(URL)
BMBF (Germany) (URL)
Show Notes
Mouse
Mus musculus
 Mammal Chr 2: 1Mb Finished region
BAC-based Shotgun (or other large clone) Finishing
Start: 3-2004
End: unspec.
GGSAC (Germany)
(URL)
BMBF (Germany) (URL)
Show Notes
Arthroderma benhamiae
Arthroderma benhamiae
 Fungus Genome Draft Assembly,
Finished region
Whole Genome Shotgun (8X)
Start: 1-2007
End: 12-2008
Project URL
GGSAC (Germany)
(URL)
BMBF (Germany) (URL)
TKM (Thüringer Kultusministerium) http://www.thueringen.de/de/tkm; WGL (Wissenschaftsgemeinschaft Gottfried Wilhelm Leibniz) http://www.wgl.de; HKI (Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute) http://www.hki-jena.de
Show Notes
Turquoise killifish
Nothobranchius furzeri
 Fish Genome Other,
Whole Genome Sample Sequences
Whole Genome Shotgun (0.5X)
Start: 5-2006
End: 4-2008
Project URL
GGSAC (Germany)
(URL)
BMBF (Germany) (URL)
TKM (Thüringer Kultusministerium) http://www.thueringen.de/de/tkm; WGL (Wissenschaftsgemeinschaft Gottfried Wilhelm Leibniz) http://www.wgl.de
Show Notes
Chimpanzee
Pan troglodytes
 Mammal 40Mb on chromosome X Finished region
BAC-based Shotgun (or other large clone) Finishing
Start: 7-2005
End: 6-2008
Project URL
GGSAC (Germany)
(URL)
BMBF (Germany) (URL)
Mouse
Mus musculus
 Mammal Chr 12 (IgH locus): 2 Mb Finished region
BAC-based Shotgun (or other large clone) (4X) Finishing (10X)
Start: 3-2004
End: unspec.
Project URL
GGSAC (Germany)
(URL)
BMBF (Germany) (URL)
Show Notes
Slime mold
Dictyostelium discoideum
 Protist Chr 1, 2, 3 Finished region
Whole Genome Shotgun (6.5X)
Completed
Start: 12-2003
End: 5-2005
Project URL
GGSAC (Germany)
(URL)
DFG (Germany) (URL)
Show Notes
Slime mold
Polysphondilium pallidum
 Protist whole genome Finished genome
Whole Genome Shotgun Finishing
Start: 3-2006
End: 12-2008
GGSAC (Germany)
(URL)
DFG (Germany) (URL)
Wellcome Trust (URL)
Show Notes
Slime mold
Dictyostelium fasciculatum
 Protist Genome Draft Assembly,
Regional assembly,
Finished region
Whole Genome Shotgun (8X)
Start: 3-2006
End: 3-2008
GGSAC (Germany)
(URL)
DFG (Germany) (URL)
Show Notes
Bovine
Bos taurus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X) BAC-based Shotgun (or other large clone) (2X)
Start: 11-2006
End: 2007
Project URL
BCM-HGSC (USA)
(URL)
Genome Canada (USA) (URL)
USDA (URL)
NHGRI (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Poplar
Populus spp.
 Plant Genome Other,
Unspecified
Other
Completed
Start: 2006
End: 1-2006
Project URL
BCGSC (Canada)
(URL)
Genome Canada (Canada) (URL)
Show Notes
Cryptococcus
Cryptococcus neoformans WM276
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 2006
End: 1-2006
Project URL
BCGSC (Canada)
(URL)
Genome Canada (Canada) (URL)
Show Notes
Bovine
Bos taurus
 Mammal Selected regions Holstein breed SNP discovery
BAC-based Shotgun (or other large clone)
Start: 3-2006
End: 2006
Project URL
BCM-HGSC (USA)
(URL)
Genome Canada (USA) (URL)
USDA (URL)
NHGRI (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Nematode
Pristionchus pacificus var California
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (9X)
Start: 8-2004
End: 2007
Project URL
WUGSC (USA)
(URL)
Genome Canada (USA) (URL)
NHGRI (URL)
Show Notes
Bovine
Bos taurus
 Mammal Genomes of 8 breeds SNP discovery
Whole Genome Shotgun
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
Genome Canada (USA) (URL)
USDA (URL)
NHGRI (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Fruitfly
Drosophila melanogaster
 Invertebrate Animal Genome Other,
Finished
Finishing
Completed
Start: 1-2001
End: 1-2002
BCM-HGSC (USA)
(URL)
HHMI (USA) (URL)
NHGRI (URL)
NIGMS (URL)
NCI (URL)
Show Notes
Fruitfly
Drosophila melanogaster
 Invertebrate Animal Genome Other,
Finished
Finishing
Completed
Start: 1-2001
End: 1-2002
BCM-HGSC (USA)
(URL)
NCI (USA) (URL)
NHGRI (URL)
NIGMS (URL)
HHMI (URL)
Show Notes
Chicken
Gallus gallus
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Zebrafish
Danio rerio
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila virilis
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 5-2004
End: 9-2004
ABC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Fruitfly
Drosophila mojavensis
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 8-2004
End: 11-2004
ABC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Opossum
Monodelphis domestica
 Mammal Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (7X)
Completed
Start: 10-2004
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Planarian
Schmidtea mediterranea
 Invertebrate Animal Genome Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (8X)
Start: 11-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Macaque, Rhesus
Macaca mulatta
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) BAC-based Shotgun (or other large clone) (2X)
Start: 12-2005
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Human
Homo sapiens
 Mammal Genome SNP discovery
Whole Genome Shotgun (1X)
Completed
Start: 5-2004
End: 4-2008
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila pseudoobscura
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 10-2003
End: 1-2005
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 3, 12, part of X Other,
Finished
BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 4-2003
End: 4-2006
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila yakuba
 Invertebrate Animal Genome Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (8X)
Completed
Start: 12-2003
End: 2-2006
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Fruitfly
Drosophila simulans
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: 12-2003
End: 4-2005
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Fruitfly
Drosophila sechellia
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (3X)
Completed
Start: 8-2005
End: 8-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 8-2004
End: unspec.
TIGR (USA)
(URL)
NHGRI (USA) (URL)
Bovine
Bos taurus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X) BAC-based Shotgun (or other large clone) (2X)
Start: 11-2006
End: 2007
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Yeast
Saccharomyces bayanus
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Mouse
Mus musculus
 Mammal Chr Y Finished region
BAC-based Shotgun (or other large clone) Whole Genome Shotgun Finishing
Start: 12-2006
End: 12-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Chicken
Gallus gallus
 Bird Genome Finished region
Whole Genome Shotgun (6X) Finishing
Start: 8-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Human
Homo sapiens
 Mammal Chr 2, 4, 7, Y Other,
Unspecified
Other
Start: 5-2006
End: 12-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Corn Smut Disease
Ustilago maydis 521
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: unspec.
End: 7-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Rhizopus
Rhizopus oryzae RA99-880
 Fungus Genome Draft Assembly
Whole Genome Shotgun (14X)
Completed
Start: 11-2004
End: 8-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Dog
Canis familiaris
 Mammal Genome Draft Assembly,
SNP discovery,
Other,
Improved Genome
Whole Genome Shotgun (6.5X) BAC-based Shotgun (or other large clone)
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
American Kennel Club
Show Notes
Human
Homo sapiens
 Mammal Genome SNP discovery
Whole Genome Shotgun (1X)
Completed
Start: unspec.
End: 8-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 8, 15, 17, 18q Finished genome
BAC-based Shotgun (or other large clone) Finishing
Start: 4-2003
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Shark, Dogfish (spiny)
Squalus acanthias
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Bat, Short-tailed Fruit
Carollia perspicillata
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Cat
Felis catus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Baboon
Papio hamadryas
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Chimpanzee
Pan troglodytes
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: unspec.
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Saccharomyces kluyveri
 Fungus Genome Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (10X)
Start: 12-2004
End: 6-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Saccharomyces castellii
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Saccharomyces kudriavzevii
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Saccharomyces mikatae
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Shark, Nurse
Ginglymostoma cirratum
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Muntjak, Indian
Muntiacus muntjak vaginalis
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Monkey, Owl
Aotus nancymaae
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Monkey, Colobus
Colobus guereza
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Monkey, Black-handed spider
Ateles geoffroyi
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Monkey, Bolivian squirrel
Saimiri boliviensis boliviensis
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Leopard, Clouded
neofelis nebulosa
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Lemur, ring-tailed
Lemur catta
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Guinea pig
Cavia porcellus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces cerevisiae RM11-1a
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 11-2004
End: 12-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Cryptococcus
Cryptococcus neoformans sero B R265
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Uncinocarpus
Uncinocarpus reesii 1704
 Fungus Genome Draft Assembly
Whole Genome Shotgun (5X)
Completed
Start: unspec.
End: 11-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Chaetomium
Chaetomium globosum CBS 148.51
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Lodderomyces
Lodderomyces elongisporus NRRLYB-4239
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 10-2005
End: 6-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Candida tropicalis MYA-3404
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Candida lusitaniae ATCC 42720
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Candida guilliermondii ATCC6260
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Beetle, Red Flour
Tribolium castaneum
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (7X) BAC-based Shotgun (or other large clone) (0.5X)
Completed
Start: 12-2005
End: 4-2008
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Orangutan
Pongo pygmaeus abelii
 Mammal Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 6-2006
End: 2-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Shrew, Tree
Tupaia belangeri
 Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 9-2007
End: 3-2008
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Cat
Felis catus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 1-2008
End: 5-2008
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Turkey
Meleagris gallopavo
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Opossum, North American
Didelphis virginiana
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Gibbon, Northern white-cheeked
Nomascuc leucogenys
 Mammal Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 2007
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Sea urchin
Strongylocentrotus purpuratus
 Invertebrate Animal Genome Whole-genome Map,
SNP discovery,
Comparative-grade finished regions
Upgrade
Start: 2007
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Armadillo
Dasypus novemcinctus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 10-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Megabat
Pteropus vampyrus
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: 1-2006
End: 12-2008
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Kangaroo rat
Dipodomys ordii
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: 8-2006
End: 12-2008
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Dolphin, Bottlenose
Tursiops truncatus
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2.5X)
Start: 7-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Cat
Felis catus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 1-2005
End: 8-2005
ABC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Slime mold
Physarum polycephalum
 Invertebrate Animal Genome Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6X)
Start: 1-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Ciliate
Oxytricha trifallax (macronucleus)
 Protist Whole chromosomes Draft Assembly,
Comparative-grade finished regions
Whole Chromosome Shotgun (4X)
Start: 11-2004
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Kluyveromyces waltii NCYC 2644
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: unspec.
End: 3-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Darling's Disease
Histoplasma capsulatum NAm1
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: unspec.
End: 8-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Cat
Felis catus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Muntjac, Chinese
Muntiacus reevesi
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Catfish, Channel
Ictalurus punctatus
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Pufferfish, Southern
Sphoeroides nephelus
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Salmon
Salmo salar
 Fish Seleced regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Sheep
Ovis aries
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Shrew, European common
Sorex araneus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Skate, Little
Leucoraja erinacea
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Squirrel, Thirteen-lined Ground
Spermophilus tridecemlineatus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Stickleback, Three-spined
Gasterosteus aculeatus
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Tenrec
Echinops telfairi
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Tortoise, Desert
Gopherus agassizii
 Reptile Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Tuatara
Sphenodon punctatus
 Reptile Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Wallaby, Tammar
Macropus eugenii
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Condor, California
Gymnogyps californianus
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Lemur, Black
Eulemur macaco macaco
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Alligator
Alligator mississippiensis
 Reptile Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Aphid, Pea
Buchnera aphidicola str. APS - Acyrthosiphon pisum
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 5-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Wasp, Parasitoid
Nasonia vitripennis
 Invertebrate Animal Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Wasp, Parasitoid
Nasonia giraulti
 Invertebrate Animal Genome Whole-genome Map,
SNP discovery
Whole Genome Shotgun
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Wasp, Parasitoid
Nasonia longicornis
 Invertebrate Animal Genome Whole-genome Map,
SNP discovery
Whole Genome Shotgun
Start: 8-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Acorn worm
Saccoglossus kowalevskii
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (7X)
Start: 2-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Hyrax
Procavia capensis
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: 3-2006
End: 12-2008
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Amoeba
Acanthamoeba castellanii
 Protist Genome Draft Assembly
Whole Genome Shotgun (20X)
Start: 5-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Marmoset, Common
Callithrix jacchus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (7X)
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Honey bee
Apis mellifera
 Invertebrate Animal Genome Draft Assembly,
Finished region
Other
Start: 6-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Rat
Rattus norvegicus
 Mammal Genome Finished region,
SNP discovery
Other
Start: 4-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Bat, Little Brown
Myotis lucifugus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) Whole Genome Shotgun (5X)
Start: 8-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Horse
Equus caballus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 2-2006
End: 8-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Lemur, Gray Mouse
Microcebus murinus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) Whole Genome Shotgun (5X)
Start: 9-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Pika
Ochotona princeps
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 8-2006
End: 4-2007
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Lizard, Anole
Anolis carolinensis
 Reptile Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 7-2006
End: 7-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA19240) SNP discovery,
Other,
Structural Variation
Whole Genome Shotgun (0.5X)
Completed
Start: 3-2006
End: 5-2006
ABC (USA)
(URL)
NHGRI (USA) (URL)
Shrew, Tree
Tupaia belangeri
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 9-2005
End: 7-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Squirrel, Ground
Spermophilus tridecemlineatus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 10-2005
End: 6-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Schizosaccharomyces octosporus yFS286
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 7-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Schizzosaccharomyces japonicus yFS275
 Fungus Genome Draft Assembly
Whole Genome Shotgun (9X)
Completed
Start: 8-2005
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Galago/Bush Baby
Otolemur garnetti
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 12-2005
End: 1-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Hedgehog, European
Erinaceus europeaus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 10-2005
End: 10-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Glume blotch
Stagonospora nodorum SN15
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 1-2003
End: 5-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
GRDC (Australia)
Show Notes
Mold, Gray
Botrytis cinerea B05.10
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: 7-2005
End: 7-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Syngenta
Show Notes
Stickleback, Three-spined
Gasterosteus aculeatus
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (9X)
Completed
Start: unspec.
End: 2-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Galago/Bush Baby
Otolemur garnetti
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Marmoset, Common
Callithrix jacchus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Armadillo
Dasypus novemcinctus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Bat, Horseshoe
Rhinolophus ferrumequinum
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Tarsier
Tarsius syrichta
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 5-2007
End: 4-2008
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Shrew, Tree
Tupaia belangeri
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Hyrax
Procavia capensis
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Megabat
Pteropus vampyrus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Platypus
Ornithorhynchus anatinus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 12-2006
End: 4-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Alpaca
Vicugna pacos
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 8-2007
End: 12-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Colugo
Cynocephalus variegatus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 6-2007
End: 2-2008
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Pangolin, Chinese
Manis pentadactyla
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 7-2007
End: 1-2008
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Sloth
Choloepus hoffmanni
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 6-2007
End: 12-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Tardigrade
Hypsibius dujardini
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (5X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Snail, Freshwater
Biomphalaria glabrata
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (3X)
Start: 1-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Wellcome Trust (URL)
The Wellcome Trust Sanger Institute is providing at least 40,000 ESTs for this project.
Lamprey, Sea
Petromyzon marinus
 Fish Genome BAC-end sequence,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6X)
Start: 3-2004
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Tenrec
Echinops telfairi
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 5-2005
End: 5-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Rabbit
Oryctolagus cuniculus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) Whole Genome Shotgun (5X)
Start: 1-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Elephant, African
Loxodonta africana
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) Whole Genome Shotgun (5X)
Start: 1-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Guinea pig
Cavia porcellus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (7X)
Start: 7-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Armadillo
Dasypus novemcinctus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 1-2005
End: 1-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Bovine
Bos taurus
 Mammal Genomes of 8 breeds SNP discovery
Whole Genome Shotgun
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Zebrafinch
Taeniopygia guttata
 Bird Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 5-2006
End: 10-2007
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Honey bee
Apis mellifera
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X) BAC-based Shotgun (or other large clone) (2X)
Completed
Start: 6-2005
End: 7-2006
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Corn
Zea mays B73
 Plant Genome Draft Assembly,
Finished region
BAC-based Shotgun (or other large clone) (6X)
Start: 11-2005
End: 10-2008
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
NSF (URL)
USDOE (URL)
Joint project with NSF/USDA/DOE. Shotgun sequencing of Mo17 by the Joint Genome Institute.
Show Notes
Wallaby, Tammar
Macropus eugenii
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 6-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Australian Genome Research Facility Ltd. (AGRF) (URL) The Victorian State Government (URL) Brockhoff Foundation
Show Notes
Mouse
Mus musculus
 Mammal Chr 6, 10 Finished region
Finishing
Completed
Start: 12-2005
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Bovine
Bos taurus
 Mammal Selected regions Holstein breed SNP discovery
BAC-based Shotgun (or other large clone)
Start: 3-2006
End: 2006
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Gorilla
Gorilla gorilla gorilla
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Gibbon
Nomascus leucogenys leucogenys
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Frog, South African clawed
Xenopus tropicalis
 Amphibian Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Ferret
Mustela furo
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Emu
Dromaius novaehollandiae
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Elephant, African
Loxodonta africana
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Echidna, Australian
Tachyglossus aculeatus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Dusky titi
Callicebus moloch
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Caenorhabditis japonia
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 9-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Nematode
Caenorhabditis brenneri
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 1-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Nematode
Caenorhabditis remanei
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 2-2004
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Human gut microbiome-100 organisms
Bacteriodetes and Firmicutes
 Invertebrate Animal Whole genomes Draft Assembly,
Comparative-grade finished regions
Whole Genome Shotgun (4X) 454 sequence (15X) automated and some manual sequence improvement
Start: 4-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Marmoset, Common
Callithrix jacchus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 5-2006
End: 4-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Bovine
Bos taurus
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Opossum
Monodelphis domestica
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Rat
Rattus norvegicus
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Macaque, Rhesus
Macaca mulatta
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Marmoset, Common
Callithrix jacchus
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Trichina worm
Trichinella spiralis
 Invertebrate Animal Genome BAC-end sequence,
Whole-genome Map,
Draft Assembly,
Other,
ESTs
Whole Genome Shotgun (8X) Automated sequence improvement BAC fingerprint map, BAC end sequences, and ESTs (0.5X)
Start: 1-2005
End: 6-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Pristionchus pacificus var California
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (9X)
Start: 8-2004
End: 2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Genome Canada (URL)
Show Notes
Sandfly-Leishmania vector
Phlebotomus papatasi
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (2X) BAC end sequencing (0.5X) EST and 454 cDNA
Start: 1-2007
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Mosquito
Anopheles gambiae M
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (8X) BAC end sequencing (0.5X)
Start: 6-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Rat
Rattus norvegicus
 Mammal Y chromosome BAC-end sequence,
Regional assembly,
Finished region
BAC-based Shotgun (or other large clone) (6X) Finishing
Start: 6-2006
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Bovine
Bos taurus
 Mammal Y chromosome BAC-end sequence,
Regional assembly,
Finished region
BAC-based Shotgun (or other large clone) (6X) Finishing
Start: 6-2006
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Dwarf honey bee
Apis florea
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (15X)
Start: 2008
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Bumble bee
Bombus terrestris
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (15X)
Start: 2008
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Sandfly
Lutzomyia longipalpis
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (15X)
Start: 2008
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Centipede
Strigamia maritima
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 1-2008
End: 1-2008
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Cotton bollworm
Helicoverpa armigera
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (15X)
Start: 1-2008
End: 2008
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Oldfield mouse
Peromyscus polionotus
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: 2008
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
White-footed mouse
Peromyscus leucopus
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: unspec.
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
California mouse
Peromyscus californicus
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: 2008
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Deer mouse
Peromyscus maniculatus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 2008
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Lemur, Gray Mouse
Microcebus murinus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 2-2008
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Baboon
Papio hamadryas
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 6-2007
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA12156) SNP discovery,
Other,
structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 11-2006
End: 5-2007
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA19129) SNP discovery,
Other,
structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 6-2006
End: 2-2007
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA12878) SNP discovery,
Other,
structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 6-2006
End: 11-2006
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA18555) SNP discovery,
Other,
structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 3-2006
End: 2-2007
ABC (USA)
(URL)
NHGRI (USA) (URL)
Pufferfish, Spotted Green
Tetraodon nigroviridis
 Fish Genome Draft Assembly
Whole Genome Shotgun (2.5X)
Completed
Start: 6-2001
End: 10-2001
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Sea Slug
Aplysia californica
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (7X)
Start: 1-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tilapia Cichlid
Paralibidichromis chilotes
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (2X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tilapia Cichlid
Metriaclima zebra
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (2X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tilapia
Astatotilapia burtoni
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (2X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tilapia Cichlid, Nile
Oreochromis niloticus
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (7X)
Start: 6-2007
End: unspec.
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Squirrel Monkey
Saimiri sp.
 Mammal Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (7X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Amphipod crustacean
Jassa slatteryi
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (5X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Coelacanth
Latimeria chalumnae
 Fish Genome Draft Assembly
Whole Genome Shotgun
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Common Shrew, European
Sorex araneus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 9-2005
End: 6-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Trichophyton
Trichophyton tonsurans CBS112818
 Fungus Genome Draft Assembly
Whole Genome Shotgun (5X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Tinea pedia
Trichophyton rubrum CBS118892
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Ringworm, Horse
Trichophyton equinum CBS127.97
 Fungus Genome Draft Assembly
Whole Genome Shotgun (5X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Spizellomyces
Spizellomyces punctatus DAOM BR117
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Sphaeroforma
Sphaeroforma arctica JP610
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Saccharomyces paradoxus NRRL Y-17217
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: unspec.
End: 3-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces mikatae IFO1812
 Fish Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: unspec.
End: 3-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces bayanus MCYC 623-C857001
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: unspec.
End: 3-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta
 Mammal Y chromosome BAC-end sequence,
Regional assembly,
Finished region
BAC-based Shotgun (or other large clone) (6X) Finishing
Start: 6-2006
End: 2008
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Valley Fever
Coccidioides immitis RS
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: unspec.
End: 3-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Capsaspora
Capsaspora owczarzaki ATCC 30864
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Chytridiomycosis
Batrachochytrium dendrobatidis JEL423
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: unspec.
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Amoebidium
Amoebidium parasiticum JAP-7-2
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Amastigomonas
Amastigomonas sp. ATCC 50062
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Allomyces
Allomyces macrogynus ATCC 38327
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Stephanoeca
Stephanoeca sp.
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Acanthocoepis
Acanthocoepis sp.
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Kissing bug
Rhodnius prolixus
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X) automated, primer-directed sequence improvement
Start: 11-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Nematode
Heterorhabditis bacteriophora
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 12-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Proterospongia
Proterospongia sp. ATCC 50818
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Pneumonia, Mouse
Pneumocystis murina
 Fungus Genome Draft Assembly
Other
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Nuclearia
Nuclearia simplex CCAP 1552/2
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Mortierella
Mortierella verticillata NRRL 6337
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Cryptococcus
Cryptococcus neoformans sero A H99
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 5-2003
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Yeast
Candida albicans WO-1
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 10-2005
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Coprinus
Coprinus cinereus okyama 7#130
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 6-2003
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Aspergillus
Aspergillus nidulans FGSC-4A
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 2-2003
End: 2-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Chimpanzee
Pan troglodytes
 Mammal Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (4X)
Completed
Start: 5-2003
End: 8-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Mouse
Mus musculus
 Mammal Regions on all chr. excluding 2, 4, 11, X Finished region
Whole Genome Shotgun Finishing
Completed
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Mouse
Mus musculus
 Mammal Regions on all chr. excluding 2,4, 11, X Finished region
Whole Genome Shotgun BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 12-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Fruitfly
Drosophila erecta
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 9-2004
End: 3-2005
ABC (USA)
(URL)
NHGRI (USA) (URL)
Show Notes
Fruitfly
Drosophila melanogaster
 Invertebrate Animal Genome Other,
Finished
Finishing
Completed
Start: 1-2001
End: 1-2002
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
NIGMS (URL)
NCI (URL)
HHMI (URL)
Show Notes
Histoplasma
Histoplasma capsulatum G217B
 Fungus Genome BAC-end sequence,
Whole-genome Map,
Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (13X)
Start: 9-2003
End: 6-2007
Project URL
WUGSC (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Histoplasma
Histoplasma capsulatum G186AR
 Fungus Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 9-2003
End: 6-2007
Project URL
WUGSC (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Mosquito
Anopheles gambiae
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2001
End: 3-2002
Project URL
Genoscope (France)
(URL)
NIAID (France) (URL)
French Ministry of Research, World Health Organization
Show Notes
Valley Fever
Coccidioides posadasii CPA 0001
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Completed
Start: 1-2006
End: 7-2007
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Mosquito
Aedes aegyptii
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun
Start: unspec.
End: unspec.
TIGR (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Trypanosome
Trypanosoma brucei
 Protist Chr 2,3,4,5,6,7,8 Draft Assembly
BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 1-2001
End: unspec.
Project URL
TIGR (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Human trichomoniasis parasite
Trichomonas vaginalis
 Protist Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 10-2002
End: 4-2006
Project URL
TIGR (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Plasmodium
Plasmodium falciparum JDP8
 Protist Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (4X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Plasmodium
Plasmodium falciparum IGH-CR14
 Protist Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (8X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Paracoccidioidomycosis
Paracoccidioides brasiliensis Pb01
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Paracoccidioidomycosis
Paracoccidioides brasiliensis Pb03
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Paracoccidioidomycosis
Paracoccidioides brasiliensis Pb18
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Microsporum
Microsporum gypseum CBS118893
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Microsporum
Microsporum canis CBS113480
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: 1-2007
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Lacazia
Lacazia loboi EDM7
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Darling's Disease
Histoplasma capsulatum G186AR
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Dimorphic fungus (Ascomycete)
Blastomyces dermatitidis
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 3-2004
End: 5-2007
Project URL
WUGSC (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Plasmodium, Chimpanzee
Plasmodium reichenowi
 Protist Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (8X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Plasmodium
Plasmodium falciparum 87_239
 Protist Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (4X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Plasmodium
Plasmodium falciparum RAJ116
 Protist Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (4X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Darling's Disease
Histoplasma capsulatum H143
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Darling's Disease
Histoplasma capsulatum H88
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii CPA 0066
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 1-2006
End: unspec.
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii CPA 0020
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 1-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Tick
Ixodes scapularis Wikel
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 2-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Mosquito
Culex pipiens quinquefasciatus JHB
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: unspec.
End: 3-2007
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Plasmodium
Plasmodium falciparum Dd2
 Protist Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 2005
End: 8-2006
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Plasmodium
Plasmodium falciparum HB3
 Protist Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 2005
End: 2-2006
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii RMSCC 2133
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 1-2006
End: 6-2007
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii Silveria
 Fungus Genome Draft Assembly
Whole Genome Shotgun (5X)
Completed
Start: 1-2006
End: 6-2007
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides immitis RMSCC 3703
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Completed
Start: 1-2006
End: 5-2007
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides immitis RMSCC 2394
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 1-2006
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides immitis H538.4
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Completed
Start: 1-2006
End: 7-2006
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides immitis RS
 Fungus Genome Finished genome
Whole Genome Shotgun (4X) Finishing
Start: 1-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Blastomycosis
Blastomyces dermatitidis ER-3
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Blastomycosis
Blastomyces dermatitidis SLH#14081
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Aspergillus
Aspergillus terreus NIH 2624
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 12-2005
End: 11-2006
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii RMSCC 1040
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 1-2006
End: 1-2007
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii RMSCC 1038
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 1-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii RMSCC 1037
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 1-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii RMSCC 3488
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 1-2006
End: 5-2006
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Plasmodium
Plasmodium vivax
 Protist Genome
Finishing (10X)
Completed
Start: 12-2001
End: 3-2007
Project URL
TIGR (USA)
(URL)
NIAID (USA) (URL)
Burroughs Wellcome Fund, USDoD
Show Notes
Trypanosome
Trypanosoma cruzi
 Protist Genome Draft Assembly,
Finished region
Whole Genome Shotgun
Completed
Start: 4-2005
End: unspec.
Project URL
TIGR (USA)
(URL)
NIAID (USA) (URL)
Mosquito
Aedes aegyptii
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: 10-2005
End: 7-2006
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Valley Fever
Coccidioides posadasii RMSCC 3700
 Fungus Genome Draft Assembly
Whole Genome Shotgun (3X)
Completed
Start: 1-2006
End: 5-2007
Project URL
BI/MIT (USA)
(URL)
NIAID (USA) (URL)
Show Notes
Fruitfly
Drosophila melanogaster
 Invertebrate Animal Genome Other,
Finished
Finishing
Completed
Start: 1-2001
End: 1-2002
BCM-HGSC (USA)
(URL)
NIGMS (USA) (URL)
NHGRI (URL)
NCI (URL)
HHMI (URL)
Show Notes
Ciliate
Tetrahymena thermophila
 Protist Macronuclear Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 2-2005
End: unspec.
Project URL
TIGR (USA)
(URL)
NIGMS (USA) (URL)
NSF (URL)
Cryptococcus
Cryptococcus neoformans JEC21
 Fungus Genome BAC-end sequence
BAC-end sequencing
Completed
Start: 1-2003
End: unspec.
Project URL
BCGSC (Canada)
(URL)
NSERC (Canada) (URL)
Show Notes
Cryptococcus
Cryptococcus neoformans H99
 Fungus Genome BAC-end sequence
BAC-end sequencing
Completed
Start: 1-2003
End: unspec.
Project URL
BCGSC (Canada)
(URL)
NSERC (Canada) (URL)
Show Notes
Rice blast
Magnaporthe grisea 70-15
 Fungus Genome Draft Assembly,
Finished genome
Whole Genome Shotgun (7X) Finishing
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
Show Notes
Neurospora
Neurospora crassa
 Fungus Genome Draft Assembly,
Finished genome
Whole Genome Shotgun (10X) Finishing
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
Show Notes
Ciliate
Tetrahymena thermophila
 Protist Macronuclear Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 2-2005
End: unspec.
Project URL
TIGR (USA)
(URL)
NSF (USA) (URL)
NIGMS (URL)
Soybean Root rot
Phytophthora sojae
 Fungus Genome
Whole Genome Shotgun (5X) BAC-end sequencing
Start: 8-2004
End: unspec.
DOE - JGI (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
USDOE (URL)
Show Notes
Tomato
Lycopersicon esculentum
 Plant Genome Other
BAC-based Shotgun (or other large clone) (8X)
Start: 9-2004
End: unspec.
Project URL
Multiple Groups ()
(URL)
NSF (URL)
Souces of funding include Korea , China, UK, India, Spain, Netherlands, France, Japan, and Italy.
Show Notes
Downy Mildew
Hyaloperonospora parasitica Emoy2 strain
 Invertebrate Animal Genome Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (8X)
Start: 9-2004
End: 8-2007
WUGSC (USA)
(URL)
NSF (USA) (URL)
Mold, White
Sclerotinia sclerotiorum 1980
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: unspec.
End: 10-2005
Project URL
BI/MIT (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
Show Notes
Corn
Zea mays
 Plant Chromosome 10 Draft Assembly
Whole Chromosome Shotgun (6X)
Start: 11-2005
End: 10-2007
JCVI (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
USDOE (URL)
Joint project with NSF/USDA/DOE shotgun sequencing of B73 maize by WUSTL GSC.
Show Notes
Rot (necrotrophic fungus)
Alternaria brassicicola
 Fungus Genome BAC-end sequence,
Whole-genome Map,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6.5X) BAC fingerprint map; BAC end sequence (0.5X) ESTs and 454 cDNA
Start: 9-2004
End: 8-2007
Project URL
WUGSC (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
Wheat Tan Spot
Pyrenophora tritici-repentis Pt-1C-BFP
 Fungus Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: unspec.
End: 3-2007
Project URL
BI/MIT (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
Show Notes
Potato Late Blight
Phytophthora infestans T30-4
 Protist Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (8X)
Completed
Start: 11-2003
End: unspec.
BI/MIT (USA)
(URL)
NSF (USA) (URL)
Show Notes
Seed Rot, Maize
Fusarium verticillioides 7600
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X) Whole Genome Shotgun (4X)
Completed
Start: 1-2007
End: 1-2007
BI/MIT (USA)
(URL)
NSF (USA) (URL)
Syngenta: 4X WGS
Show Notes
Panama Disease
Fusarium oxysporum FGSC 4286
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 3-2006
End: 2-2007
Project URL
BI/MIT (USA)
(URL)
NSF (USA) (URL)
Show Notes
Wheat Head Blight
Fusarium graminearum PH-1
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
Show Notes
Leaf Blight, Maize
Colletotrichum graminicola M1.001
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 1-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
Show Notes
Wheat stem rust
Puccinia graminis f.sp. triciti CRL75-36-700-3
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: unspec.
End: 1-2007
Project URL
BI/MIT (USA)
(URL)
NSF (USA) (URL)
Show Notes
Legume
Medicago truncatula
 Plant Genome BAC-end sequence
BAC-based Shotgun (or other large clone) (1X)
Completed
Start: 1-2001
End: 1-2003
Project URL
PGSP (International)
(URL)
NSF (International) (URL)
NSF, Noble Foundation, EU
Show Notes
Corn
Zea mays B73
 Plant Genome Draft Assembly,
Finished region
BAC-based Shotgun (or other large clone) (6X)
Start: 11-2005
End: 10-2008
Project URL
WUGSC (USA)
(URL)
NSF (USA) (URL)
NHGRI (URL)
USDOE (URL)
Joint project with NSF/USDA/DOE. Shotgun sequencing of Mo17 by the Joint Genome Institute.
Show Notes
Parasitic Ciliate
Ichthyophthirius multifiliis
 Protist Genome Draft Assembly
Whole Genome Shotgun (10X)
Start: 12-2007
End: 11-2009
CUCVM (USA)
(URL)
NSF (USA) (URL)
Corn
Zea mays B73
 Plant Genome BAC-end sequence
400, 000 BAC-end sequencing
Start: 8-2004
End: unspec.
Multiple Groups ()
(URL)
NSF (URL)
Show Notes
Sudden Oak Death
Phytophthora ramorum
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 12-2003
End: unspec.
DOE - JGI (USA)
(URL)
NSF (USA) (URL)
USDA (URL)
USDOE (URL)
Bovine
Bos taurus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X) BAC-based Shotgun (or other large clone) (2X)
Start: 11-2006
End: 2007
Project URL
BCM-HGSC (USA)
(URL)
USDA (USA) (URL)
NHGRI (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Soybean rust (Old World)
Phakopsora pachyrhizi
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 12-2003
End: unspec.
DOE - JGI (USA)
(URL)
USDA (USA) (URL)
USDOE (URL)
Verticillium Wilts
Verticillium longisporum VdBob.70
 Fungus Genome Other,
Comparative Analysis
Whole Genome Shotgun (0.5X)
Start: 9-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
Verticillium Wilts
Verticillium albo-atrum VaMs.102
 Fungus Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (4X)
Start: 9-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
Verticillium Wilts
Verticillium dahliae VdLs.17
 Fungus Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (7X)
Start: 9-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
Wheat Tan Spot
Pyrenophora tritici-repentis Pt-1C-BFP
 Fungus Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: unspec.
End: 3-2007
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
Show Notes
Wheat Head Blight
Fusarium graminearum PH-1
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
Show Notes
Leaf Blight, Maize
Colletotrichum graminicola M1.001
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 1-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
Show Notes
Corn
Zea mays
 Plant Chromosome 10 Draft Assembly
Whole Chromosome Shotgun (6X)
Start: 11-2005
End: 10-2007
JCVI (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
USDOE (URL)
Joint project with NSF/USDA/DOE shotgun sequencing of B73 maize by WUSTL GSC.
Show Notes
Mold, White
Sclerotinia sclerotiorum 1980
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: unspec.
End: 10-2005
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
Show Notes
Pig, domesticated
Sus scrofa
 Mammal Genome Draft Assembly,
Finished region,
SNP discovery
BAC-based Shotgun (or other large clone) (3X)
Start: 4-2006
End: 12-2008
Project URL
SI (UK)
(URL)
USDA (UK) (URL)
Wellcome Trust (URL)
National Pork Board (USA); Iowa Pork Producers Association (USA); Iowa State University (USA); North Carolina Pork Council (USA); North Carolina Agriculturaal Research Service (USA); Korean National Livestock Research Institute; The Institute for Pig Genetics (Netherlands); National Institute of Agrobiological Science (Japan); European Union Cutting Edge Genomics for Sustainable Animal Breeding
Bovine
Bos taurus
 Mammal Genomes of 8 breeds SNP discovery
Whole Genome Shotgun
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
USDA (USA) (URL)
NHGRI (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Honey bee
Apis mellifera
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X) BAC-based Shotgun (or other large clone) (2X)
Completed
Start: 6-2005
End: 7-2006
Project URL
BCM-HGSC (USA)
(URL)
USDA (USA) (URL)
NHGRI (URL)
Bovine
Bos taurus
 Mammal Selected regions Holstein breed SNP discovery
BAC-based Shotgun (or other large clone)
Start: 3-2006
End: 2006
Project URL
BCM-HGSC (USA)
(URL)
USDA (USA) (URL)
NHGRI (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Rot (necrotrophic fungus)
Alternaria brassicicola
 Fungus Genome BAC-end sequence,
Whole-genome Map,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6.5X) BAC fingerprint map; BAC end sequence (0.5X) ESTs and 454 cDNA
Start: 9-2004
End: 8-2007
Project URL
WUGSC (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
Hessian fly
Mayetiola destructor
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (15X)
Start: 6-2008
End: unspec.
BCM-HGSC (USA)
(URL)
USDA (USA) (URL)
Beetle, Red Flour
Tribolium castaneum
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (7X) BAC-based Shotgun (or other large clone) (0.5X)
Completed
Start: 12-2005
End: 4-2008
Project URL
BCM-HGSC (USA)
(URL)
USDA (USA) (URL)
NHGRI (URL)
Soybean Root rot
Phytophthora sojae
 Fungus Genome
Whole Genome Shotgun (5X) BAC-end sequencing
Start: 8-2004
End: unspec.
DOE - JGI (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
USDOE (URL)
Show Notes
Sudden Oak Death
Phytophthora ramorum
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 12-2003
End: unspec.
DOE - JGI (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
USDOE (URL)
Rice blast
Magnaporthe grisea 70-15
 Fungus Genome Draft Assembly,
Finished genome
Whole Genome Shotgun (7X) Finishing
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
Show Notes
Neurospora
Neurospora crassa
 Fungus Genome Draft Assembly,
Finished genome
Whole Genome Shotgun (10X) Finishing
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
USDA (USA) (URL)
NSF (URL)
Show Notes
Chicken
Gallus gallus
 Bird Genome Finished region
Whole Genome Shotgun (6X) Finishing
Start: 8-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
USDA (USA) (URL)
NHGRI (URL)
Soybean rust (Old World)
Phakopsora pachyrhizi
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 12-2003
End: unspec.
DOE - JGI (USA)
(URL)
USDOE (USA) (URL)
USDA (URL)
Sudden Oak Death
Phytophthora ramorum
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 12-2003
End: unspec.
DOE - JGI (USA)
(URL)
USDOE (USA) (URL)
USDA (URL)
NSF (URL)
Corn
Zea mays
 Plant Chromosome 10 Draft Assembly
Whole Chromosome Shotgun (6X)
Start: 11-2005
End: 10-2007
JCVI (USA)
(URL)
USDOE (USA) (URL)
USDA (URL)
NSF (URL)
Joint project with NSF/USDA/DOE shotgun sequencing of B73 maize by WUSTL GSC.
Show Notes
Corn
Zea mays B73
 Plant Genome Draft Assembly,
Finished region
BAC-based Shotgun (or other large clone) (6X)
Start: 11-2005
End: 10-2008
Project URL
WUGSC (USA)
(URL)
USDOE (USA) (URL)
NHGRI (URL)
NSF (URL)
Joint project with NSF/USDA/DOE. Shotgun sequencing of Mo17 by the Joint Genome Institute.
Show Notes
Soybean Root rot
Phytophthora sojae
 Fungus Genome
Whole Genome Shotgun (5X) BAC-end sequencing
Start: 8-2004
End: unspec.
DOE - JGI (USA)
(URL)
USDOE (USA) (URL)
USDA (URL)
NSF (URL)
Show Notes
White rot
Phanerochaete chrysosporium
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 1-2003
End: unspec.
Project URL
DOE - JGI (USA)
(URL)
USDOE (USA) (URL)
Algae, Green
Chlamydomonas reinhardtii
 Plant Genome Draft Assembly,
Other,
Automated annotation and community curation
Whole Genome Shotgun (8X)
Start: 12-2003
End: 5-2007
Project URL
DOE - JGI (USA)
(URL)
USDOE (USA) (URL)
Mouse
Mus musculus
 Mammal Chr 2, 4, 11, X Finished region
Finishing
Completed
Start: 1-2004
End: unspec.
Project URL
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Show Notes
Tomato
Solanum lycopersicum
 Plant chromosome 4 Finished region
Finishing
Start: 1-2006
End: 10-2008
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
BBSRC
Mouse
Mus musculus
 Mammal IDD1, IDD3.1, IDD4.1, IDD4.2, IDD4.2Q, IDD5.1, IDD5.3, IDD5.4, IDD6.1, IDD6.2, IDD6.3, IDD9.1, IDD9.1M, IDD9.2, IDD9.3, IDD10.1, IDD16.1, IDD18.1, IDD18.2 Finished region
Finishing
Start: unspec.
End: 11-2007
Project URL
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Immune Tolerance Network
Whipworm
Trichuris muris
 Invertebrate Animal Genome
Whole Genome Shotgun (8X)
Start: unspec.
End: unspec.
Project URL
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Threadworm
Strongyloides ratti
 Invertebrate Animal Genome
Whole Genome Shotgun (8X)
Start: unspec.
End: unspec.
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Blood fluke
Shistosoma mansoni
 Invertebrate Animal Genome
Whole Genome Shotgun (8X)
Start: unspec.
End: unspec.
Project URL
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Show Notes
Hookworm
Nippostrongylus braziliensis
 Invertebrate Animal Genome
Whole Genome Shotgun (8X)
Start: unspec.
End: unspec.
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Barber pole worm
Haemonchus contortus
 Invertebrate Animal Genome
Whole Genome Shotgun (8X)
Start: unspec.
End: unspec.
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Tapeworm
Echinococcus multilocularis
 Invertebrate Animal Genome
Whole Genome Shotgun (8X)
Start: unspec.
End: 2007
Project URL
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Large Roundworm
Ascaris lumbicoides
 Invertebrate Animal Genome
Whole Genome Shotgun (8X)
Start: 1-2007
End: 1-2007
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Legume
Medicago truncatula
 Plant chromosome 3 Finished region
Whole Genome Shotgun Finishing
Start: unspec.
End: 2-2008
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
BBSRC, European Commission
Gorilla
Gorilla gorilla gorilla
 Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 11-2006
End: unspec.
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Slime mold
Polysphondilium pallidum
 Protist whole genome Finished genome
Whole Genome Shotgun Finishing
Start: 3-2006
End: 12-2008
GGSAC (Germany)
(URL)
Wellcome Trust (Germany) (URL)
DFG (URL)
Show Notes
Zebrafish
Danio rerio
 Fish Genome Draft Assembly
Whole Genome Shotgun BAC-based Shotgun (or other large clone)
Start: 12-2005
End: unspec.
Project URL
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
Snail, Freshwater
Biomphalaria glabrata
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (3X)
Start: 1-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
Wellcome Trust (USA) (URL)
NHGRI (URL)
The Wellcome Trust Sanger Institute is providing at least 40,000 ESTs for this project.
Pig, domesticated
Sus scrofa
 Mammal Genome Draft Assembly,
Finished region,
SNP discovery
BAC-based Shotgun (or other large clone) (3X)
Start: 4-2006
End: 12-2008
Project URL
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
USDA (URL)
National Pork Board (USA); Iowa Pork Producers Association (USA); Iowa State University (USA); North Carolina Pork Council (USA); North Carolina Agriculturaal Research Service (USA); Korean National Livestock Research Institute; The Institute for Pig Genetics (Netherlands); National Institute of Agrobiological Science (Japan); European Union Cutting Edge Genomics for Sustainable Animal Breeding
Nematode
Caenorhabditis briggsae
 Invertebrate Animal Genome Other,
Unspecified
BAC-based Shotgun (or other large clone)
Start: unspec.
End: unspec.
Project URL
SI (UK)
(URL)
Wellcome Trust (UK) (URL)
 352 Organisms on Record.


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