Acanthocoepis
Acanthocoepis sp.
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Acorn worm
Saccoglossus kowalevskii
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (7X)
Start: 2-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Alligator
Alligator mississippiensis
 Reptile Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Allomyces
Allomyces macrogynus ATCC 38327
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Alpaca
Vicugna pacos
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 8-2007
End: 12-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Amastigomonas
Amastigomonas sp. ATCC 50062
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Amoeba
Acanthamoeba castellanii
 Protist Genome Draft Assembly
Whole Genome Shotgun (20X)
Start: 5-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Amoebidium
Amoebidium parasiticum JAP-7-2
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Amphipod crustacean
Jassa slatteryi
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (5X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Aphid, Pea
Buchnera aphidicola str. APS - Acyrthosiphon pisum
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 5-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Armadillo
Dasypus novemcinctus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 1-2005
End: 1-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Armadillo
Dasypus novemcinctus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Armadillo
Dasypus novemcinctus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 10-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Aspergillus
Aspergillus nidulans FGSC-4A
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 2-2003
End: 2-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Baboon
Papio hamadryas
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Bat, Horseshoe
Rhinolophus ferrumequinum
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Bat, Jamaican Fruit-Eating
Artibeus jamaicensis
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Bat, Little Brown
Myotis lucifugus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) Whole Genome Shotgun (5X)
Start: 8-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Bat, Little Brown
Myotis lucifugus
 Mammal Selected Regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Bat, Short-tailed Fruit
Carollia perspicillata
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Beetle, Red Flour
Tribolium castaneum
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (7X) BAC-based Shotgun (or other large clone) (0.5X)
Start: 12-2005
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Bovine
Bos taurus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Bovine
Bos taurus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X) BAC-based Shotgun (or other large clone) (2X)
Start: 11-2006
End: 2007
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Bovine
Bos taurus
 Mammal Selected regions Holstein breed SNP discovery
BAC-based Shotgun (or other large clone)
Start: 3-2006
End: 2006
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Bovine
Bos taurus
 Mammal Genomes of 8 breeds SNP discovery
Whole Genome Shotgun
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Genome Canada (URL)
State of Texas (USA), CSIRO (Australia), Agritech Investments Ltd., Dairy Insight Inc., and AgResearch Ltd. (New Zealand), and Cattleman's Beef Board, Texas Beef Council and South Dakota Beef Council (USA)
Bovine
Bos taurus
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Capsaspora
Capsaspora owczarzaki ATCC 30864
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Cat
Felis catus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Cat
Felis catus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 1-2005
End: 8-2005
ABC (USA)
(URL)
NHGRI (USA) (URL)
Cat
Felis catus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 1-2008
End: 5-2008
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Cat
Felis catus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Catfish, Channel
Ictalurus punctatus
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Chaetomium
Chaetomium globosum CBS 148.51
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Chicken
Gallus gallus
 Bird Genome Finished region
Whole Genome Shotgun (6X) Finishing
Start: 8-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Chicken
Gallus gallus
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Chimpanzee
Pan troglodytes
 Mammal Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (4X)
Completed
Start: 5-2003
End: 8-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Chimpanzee
Pan troglodytes
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: unspec.
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Chimpanzee
Pan troglodytes
 Mammal Chr 7, Y Finished
BAC-based Shotgun (or other large clone) Finishing
Start: 6-2004
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Chimpanzee
Pan troglodytes
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Chytridiomycosis
Batrachochytrium dendrobatidis JEL423
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: unspec.
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Ciliate
Oxytricha trifallax (macronucleus)
 Protist Whole chromosomes Draft Assembly,
Comparative-grade finished regions
Whole Chromosome Shotgun (4X)
Start: 11-2004
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Coelacanth
Latimeria chalumnae
 Fish Genome Draft Assembly
Whole Genome Shotgun
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Colugo
Cynocephalus variegatus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 6-2007
End: 2-2008
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Common Shrew, European
Sorex araneus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 9-2005
End: 6-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Condor, California
Gymnogyps californianus
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Coprinus
Coprinus cinereus okyama 7#130
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 6-2003
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Corn
Zea mays B73
 Plant Genome Draft Assembly,
Finished region
BAC-based Shotgun (or other large clone) (6X)
Start: 11-2005
End: 10-2008
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
NSF (URL)
USDOE (URL)
Joint project with NSF/USDA/DOE. Shotgun sequencing of Mo17 by the Joint Genome Institute.
Corn Smut Disease
Ustilago maydis 521
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: unspec.
End: 7-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Cryptococcus
Cryptococcus neoformans sero A H99
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 5-2003
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Cryptococcus
Cryptococcus neoformans sero B R265
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Darling's Disease
Histoplasma capsulatum NAm1
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: unspec.
End: 8-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Dog
Canis familiaris
 Mammal Genome Draft Assembly,
SNP discovery,
Other,
Improved Genome
Whole Genome Shotgun (6.5X) BAC-based Shotgun (or other large clone)
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
American Kennel Club
Dog
Canis familiaris
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Dog
Canis familiaris
 Mammal Genome Draft Assembly
BAC-end sequences (10X)
Completed
Start: 1-2003
End: 1-2003
ABC (USA)
(URL)
NHGRI (USA) (URL)
Dolphin, Bottlenose
Tursiops truncatus
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2.5X)
Start: 7-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Dunnart
Sminthopsis crassicaudata
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Dusky titi
Callicebus moloch
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Echidna, Australian
Tachyglossus aculeatus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Elephant, African
Loxodonta africana
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) Whole Genome Shotgun (5X)
Start: 1-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Elephant, African
Loxodonta africana
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Emu
Dromaius novaehollandiae
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Ferret
Mustela furo
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Frog, South African clawed
Xenopus tropicalis
 Amphibian Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila ananassae
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 6-2004
End: 6-2004
ABC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila erecta
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 9-2004
End: 3-2005
ABC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila melanogaster
 Invertebrate Animal Genome Finished
Finishing
Completed
Start: 1-2001
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
NIGMS (URL)
NCI (URL)
HHMI (URL)
Fruitfly
Drosophila mojavensis
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 8-2004
End: 11-2004
ABC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila persimilis
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (3X)
Completed
Start: 7-2005
End: 7-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila pseudoobscura
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 10-2003
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila sechellia
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (3X)
Completed
Start: 8-2005
End: 8-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila simulans
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: 12-2003
End: 4-2005
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila virilis
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 5-2004
End: 9-2004
ABC (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila willistoni
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (7.5X)
Start: 2005
End: unspec.
TIGR (USA)
(URL)
NHGRI (USA) (URL)
Fruitfly
Drosophila yakuba
 Invertebrate Animal Genome Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (8X)
Completed
Start: 12-2003
End: 2-2006
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Galago/Bush Baby
Otolemur garnetti
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Galago/Bush Baby
Otolemur garnetti
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 12-2005
End: 1-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Gibbon
Nomascus leucogenys leucogenys
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Gibbon, Northern white-cheeked
Nomascuc leucogenys
 Mammal Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 2007
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Glume blotch
Stagonospora nodorum SN15
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 1-2003
End: 5-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
GRDC (Australia)
Gorilla
Gorilla gorilla gorilla
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Guinea pig
Cavia porcellus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (7X)
Start: 7-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Guinea pig
Cavia porcellus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Hedgehog
Atelerix albiventris
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Hedgehog, European
Erinaceus europeaus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 10-2005
End: 10-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Honey bee
Apis mellifera
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X) BAC-based Shotgun (or other large clone) (2X)
Completed
Start: 6-2005
End: 7-2006
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
USDA (URL)
Honey bee
Apis mellifera
 Invertebrate Animal Genome Draft Assembly,
Finished region
Other
Start: 6-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Horse
Equus caballus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Horse
Equus caballus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 2-2006
End: 8-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 3, 12, part of X Finished
BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 4-2003
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome SNP discovery
Whole Genome Shotgun (1X)
Completed
Start: 5-2004
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 2, 4, 7, Y Finished
BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 4-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 8, 15, 17, 18q Finished genome
BAC-based Shotgun (or other large clone) Finishing
Start: 4-2003
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome SNP discovery
Whole Genome Shotgun (1X)
Completed
Start: unspec.
End: 8-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 2, 4, 7, Y Other,
Unspecified
Other
Start: 5-2006
End: 12-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 2, 7, 21 SNP discovery
Whole Genome Shotgun (1X)
Start: 7-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal All chromosomes - segmental duplications Finished
BAC-based Shotgun (or other large clone) Finishing
Start: unspec.
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 15q14-21.3 Finished
BAC-based Shotgun (or other large clone) (8X) Finishing (1X)
Completed
Start: 1-2003
End: unspec.
ISB (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 1: 50.12 Mb Finished
BAC-based Shotgun (or other large clone) (8X) Finishing
Completed
Start: 4-2003
End: unspec.
UWGC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 3: 61.49 Mb Finished
BAC-based Shotgun (or other large clone) (8X) Finishing
Completed
Start: 4-2003
End: unspec.
UWGC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Chr 7: 17.19 Mb Finished
BAC-based Shotgun (or other large clone) (8X) Finishing
Completed
Start: 4-2003
End: unspec.
UWGC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA18517) SNP discovery,
Other,
Structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 6-2005
End: 9-2005
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA18507) SNP discovery,
Other,
Structural variatino
Whole Genome Shotgun (0.5X)
Completed
Start: 9-2005
End: 2-2006
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA18956) SNP discovery,
Other,
Structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 1-2006
End: 3-2006
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA19240) SNP discovery,
Other,
Structural Variation
Whole Genome Shotgun (0.5X)
Completed
Start: 3-2006
End: 5-2006
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA18555) SNP discovery,
Other,
structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 3-2006
End: 2-2007
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA12878) SNP discovery,
Other,
structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 6-2006
End: 11-2006
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA19129) SNP discovery,
Other,
structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 6-2006
End: 2-2007
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human
Homo sapiens
 Mammal Genome (NA12156) SNP discovery,
Other,
structural variation
Whole Genome Shotgun (0.5X)
Completed
Start: 11-2006
End: 5-2007
ABC (USA)
(URL)
NHGRI (USA) (URL)
Human gut microbiome-100 organisms
Bacteriodetes and Firmicutes
 Invertebrate Animal Whole genomes Draft Assembly,
Comparative-grade finished regions
Whole Genome Shotgun (4X) 454 sequence (15X) automated and some manual sequence improvement
Start: 4-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Hyrax
Procavia capensis
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: 3-2006
End: unspec.
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Hyrax
Procavia capensis
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Kangaroo rat
Dipodomys ordii
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: 8-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Kissing bug
Rhodnius prolixus
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X) automated, primer-directed sequence improvement
Start: 11-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Lamprey, Sea
Petromyzon marinus
 Fish Genome BAC-end sequence,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6X)
Start: 3-2004
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Lemur, Black
Eulemur macaco macaco
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Lemur, Gray Mouse
Microcebus murinus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Lemur, Gray Mouse
Microcebus murinus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) Whole Genome Shotgun (5X)
Start: 9-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Lemur, ring-tailed
Lemur catta
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Leopard, Clouded
neofelis nebulosa
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Lizard, Anole
Anolis carolinensis
 Reptile Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 7-2006
End: 7-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Lodderomyces
Lodderomyces elongisporus NRRLYB-4239
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 10-2005
End: 6-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) BAC-based Shotgun (or other large clone) (2X)
Start: 12-2005
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 8-2004
End: unspec.
TIGR (USA)
(URL)
NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: unspec.
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: unspec.
End: unspec.
JCVI (USA)
(URL)
NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Marmoset, Common
Callithrix jacchus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Marmoset, Common
Callithrix jacchus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (7X)
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Marmoset, Common
Callithrix jacchus
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Marmoset, Common
Callithrix jacchus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 5-2006
End: 4-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Megabat
Pteropus vampyrus
 Mammal Genome Whole-genome Map
Whole Genome Shotgun (2X)
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Megabat
Pteropus vampyrus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Mold, Gray
Botrytis cinerea B05.10
 Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: 7-2005
End: 7-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Syngenta
Monkey, Black-handed spider
Ateles geoffroyi
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Monkey, Bolivian squirrel
Saimiri boliviensis boliviensis
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Monkey, Colobus
Colobus guereza
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Monkey, Owl
Aotus nancymaae
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Monkey, Vervet
Cercopithecus aethiops
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Mortierella
Mortierella verticillata NRRL 6337
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Mosquito
Anopheles gambiae M
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (8X) BAC end sequencing (0.5X)
Start: 6-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Mouse
Mus musculus
 Mammal Regions on all chr. excluding 2,4, 11, X Finished region
Whole Genome Shotgun BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 12-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Mouse
Mus musculus
 Mammal Regions on all chr. excluding 2, 4, 11, X Finished region
Whole Genome Shotgun Finishing
Completed
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Mouse
Mus musculus
 Mammal Chr Y Finished region
BAC-based Shotgun (or other large clone) Whole Genome Shotgun Finishing
Start: 12-2006
End: 12-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Mouse
Mus musculus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Completed
Start: 8-2003
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Mouse
Mus musculus
 Mammal Chr 6, 10 Finished region
Finishing
Completed
Start: 12-2005
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Muntjac, Chinese
Muntiacus reevesi
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Muntjak, Indian
Muntiacus muntjak vaginalis
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Caenorhabditis brenneri
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 1-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Caenorhabditis briggsae
 Invertebrate Animal Genome Improved Draft
Whole Genome Shotgun
Start: 12-2004
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Caenorhabditis elegans
 Invertebrate Animal Genome Finished
Whole Genome Shotgun Finishing
Completed
Start: 1-2001
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Caenorhabditis japonia
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 9-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Caenorhabditis remanei
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 2-2004
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Heterorhabditis bacteriophora
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 12-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Nematode
Pristionchus pacificus var California
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (9X)
Start: 8-2004
End: 2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Genome Canada (URL)
Nuclearia
Nuclearia simplex CCAP 1552/2
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Opossum
Monodelphis domestica
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Opossum
Monodelphis domestica
 Mammal Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (7X)
Completed
Start: 10-2004
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Opossum
Monodelphis domestica
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Opossum, North American
Didelphis virginiana
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Orangutan
Pongo pygmaeus pygmaeus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Orangutan
Pongo pygmaeus pygmaeus
 Mammal Genome Genome assembly,
Finished region,
SNP discovery
Whole Genome Shotgun (3X)
Start: 2-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Orangutan
Pongo pygmaeus pygmaeus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 6-2006
End: 2-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Pangolin, Chinese
Manis pentadactyla
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 7-2007
End: 1-2008
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Pig, Wild
Sus scrofa
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Pika
Ochotona princeps
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 8-2006
End: 4-2007
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Planarian
Schmidtea mediterranea
 Invertebrate Animal Genome Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (8X)
Start: 11-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Platypus
Ornithorhynchus anatinus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Platypus
Ornithorhynchus anatinus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 12-2006
End: 4-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Pneumonia, Mouse
Pneumocystis murina
 Fungus Genome Draft Assembly
Other
Start: unspec.
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Polyp, Freshwater
Hydra magnipapillata
 Invertebrate Animal Genome Draft Assembly
(0.5X)
Start: 1-2005
End: unspec.
JCVI (USA)
(URL)
NHGRI (USA) (URL)
Proterospongia
Proterospongia sp. ATCC 50818
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Pufferfish, Japanese
Takifugu rubripes
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Pufferfish, Southern
Sphoeroides nephelus
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Pufferfish, Spotted Green
Tetraodon nigroviridis
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Pufferfish, Spotted Green
Tetraodon nigroviridis
 Fish Genome Draft Assembly
Whole Genome Shotgun (2.5X)
Completed
Start: 6-2001
End: 10-2001
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Rabbit
Oryctolagus cuniculus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Rabbit
Oryctolagus cuniculus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X) Whole Genome Shotgun (5X)
Start: 1-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Rat
Rattus norvegicus
 Mammal QTLs Finishing
Whole Genome Shotgun BAC-based Shotgun (or other large clone)
Completed
Start: 12-2004
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Rat
Rattus norvegicus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (5X) BAC-based Shotgun (or other large clone) (2X)
Completed
Start: 1-2003
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
NHLBI (URL)
Rat
Rattus norvegicus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (5X) BAC-based Shotgun (or other large clone) (2X)
Completed
Start: 1-2003
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
NHLBI (URL)
Rat
Rattus norvegicus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Completed
Start: 8-2003
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Rat
Rattus norvegicus
 Mammal Genome Finished region,
SNP discovery
Other
Start: 4-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Rat
Rattus norvegicus
 Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Rhizopus
Rhizopus oryzae RA99-880
 Fungus Genome Draft Assembly
Whole Genome Shotgun (14X)
Completed
Start: 11-2004
End: 8-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Ringworm, Horse
Trichophyton equinum CBS127.97
 Fungus Genome Draft Assembly
Whole Genome Shotgun (5X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Salmon
Salmo salar
 Fish 4 Mb Unspecified
BAC-based Shotgun (or other large clone)
Start: 2005
End: unspec.
Project URL
BCGSC (Canada)
(URL)
NHGRI (Canada) (URL)
Genome Canada (URL)
Salmon
Salmo salar
 Fish Seleced regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Sandfly-Leishmania vector
Phlebotomus papatasi
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (2X) BAC end sequencing (0.5X) EST and 454 cDNA
Start: 1-2007
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Sea Slug
Aplysia californica
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (7X)
Start: 1-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Sea squirt
Ciona savignyi
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (13X)
Completed
Start: 11-2003
End: 11-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Sea urchin
Strongylocentrotus purpuratus
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X) BAC-based Shotgun (or other large clone) (2X)
Start: 12-2005
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Sea urchin
Strongylocentrotus purpuratus
 Invertebrate Animal Genome Whole-genome Map,
SNP discovery,
Comparative-grade finished regions
Upgrade
Start: 2007
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Shark, Dogfish (spiny)
Squalus acanthias
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Shark, Nurse
Ginglymostoma cirratum
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Sheep
Ovis aries
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Shrew, European common
Sorex araneus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Shrew, Tree
Tupaia belangeri
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 9-2005
End: 7-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Shrew, Tree
Tupaia belangeri
 Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 9-2007
End: 3-2008
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Shrew, Tree
Tupaia belangeri
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Skate, Little
Leucoraja erinacea
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Slime mold
Physarum polycephalum
 Invertebrate Animal Genome Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6X)
Start: 1-2005
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Sloth
Choloepus hoffmanni
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 6-2007
End: 12-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Snail, Freshwater
Biomphalaria glabrata
 Invertebrate Animal Genome BAC-end sequence,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (3X)
Start: 1-2006
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Wellcome Trust (URL)
The Wellcome Trust Sanger Institute is providing at least 40,000 ESTs for this project.
Sphaeroforma
Sphaeroforma arctica JP610
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Spizellomyces
Spizellomyces punctatus DAOM BR117
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 4-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Squirrel Monkey
Saimiri sp.
 Mammal Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (7X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Squirrel, Ground
Spermophilus tridecemlineatus
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 10-2005
End: 6-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Squirrel, Thirteen-lined Ground
Spermophilus tridecemlineatus
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Stephanoeca
Stephanoeca sp.
 Protist Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 3-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Stickleback, Three-spined
Gasterosteus aculeatus
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (9X)
Completed
Start: unspec.
End: 2-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Stickleback, Three-spined
Gasterosteus aculeatus
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Tardigrade
Hypsibius dujardini
 Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (5X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tarsier
Tarsius syrichta
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 5-2007
End: 4-2008
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Tenrec
Echinops telfairi
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Completed
Start: 5-2005
End: 5-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tenrec
Echinops telfairi
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Tilapia
Astatotilapia burtoni
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (2X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tilapia Cichlid
Metriaclima zebra
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (2X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tilapia Cichlid
Paralibidichromis chilotes
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (2X)
Start: 6-2007
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tilapia Cichlid, Nile
Oreochromis niloticus
 Fish Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun (7X)
Start: 6-2007
End: unspec.
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tinea pedia
Trichophyton rubrum CBS118892
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tortoise, Desert
Gopherus agassizii
 Reptile Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Trichina worm
Trichinella spiralis
 Invertebrate Animal Genome BAC-end sequence,
Whole-genome Map,
Draft Assembly,
Other,
ESTs
Whole Genome Shotgun (8X) Automated sequence improvement BAC fingerprint map, BAC end sequences, and ESTs (0.5X)
Start: 1-2005
End: 6-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Trichophyton
Trichophyton tonsurans CBS112818
 Fungus Genome Draft Assembly
Whole Genome Shotgun (5X)
Start: 8-2006
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Tuatara
Sphenodon punctatus
 Reptile Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Turkey
Meleagris gallopavo
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Uncinocarpus
Uncinocarpus reesii 1704
 Fungus Genome Draft Assembly
Whole Genome Shotgun (5X)
Completed
Start: unspec.
End: 11-2005
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Valley Fever
Coccidioides immitis RS
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: unspec.
End: 3-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Wallaby, Tammar
Macropus eugenii
 Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 6-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Australian Genome Research Facility Ltd. (AGRF) (URL) The Victorian State Government (URL) Brockhoff Foundation
Wallaby, Tammar
Macropus eugenii
 Mammal Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Wasp, Parasitoid
Nasonia giraulti
 Invertebrate Animal Genome Whole-genome Map,
SNP discovery
Whole Genome Shotgun
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Wasp, Parasitoid
Nasonia longicornis
 Invertebrate Animal Genome Whole-genome Map,
SNP discovery
Whole Genome Shotgun
Start: 8-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Wasp, Parasitoid
Nasonia vitripennis
 Invertebrate Animal Genome Draft Assembly,
SNP discovery
Whole Genome Shotgun
Start: 1-2006
End: unspec.
Project URL
BCM-HGSC (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Candida albicans WO-1
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 10-2005
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Candida guilliermondii ATCC6260
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Candida lusitaniae ATCC 42720
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Candida tropicalis MYA-3404
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Completed
Start: 11-2004
End: 11-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Kluyveromyces waltii NCYC 2644
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: unspec.
End: 3-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces bayanus
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces bayanus MCYC 623-C857001
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: unspec.
End: 3-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces castellii
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces cerevisiae RM11-1a
 Fungus Genome Draft Assembly
Whole Genome Shotgun (10X)
Completed
Start: 11-2004
End: 12-2004
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces kluyveri
 Fungus Genome Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (10X)
Start: 12-2004
End: 6-2007
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces kudriavzevii
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces mikatae
 Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces mikatae IFO1812
 Fish Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: unspec.
End: 3-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Saccharomyces paradoxus NRRL Y-17217
 Fungus Genome Draft Assembly
Whole Genome Shotgun (7X)
Completed
Start: unspec.
End: 3-2003
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Schizosaccharomyces octosporus yFS286
 Fungus Genome Draft Assembly
Whole Genome Shotgun (8X)
Start: 7-2005
End: unspec.
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Yeast
Schizzosaccharomyces japonicus yFS275
 Fungus Genome Draft Assembly
Whole Genome Shotgun (9X)
Completed
Start: 8-2005
End: 10-2006
Project URL
BI/MIT (USA)
(URL)
NHGRI (USA) (URL)
Zebrafinch
Taeniopygia guttata
 Bird Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
Zebrafinch
Taeniopygia guttata
 Bird Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 5-2006
End: 10-2007
WUGSC (USA)
(URL)
NHGRI (USA) (URL)
Zebrafish
Danio rerio
 Fish Selected regions Regional assembly,
Comparative-grade finished regions
BAC-based Shotgun (or other large clone) (8X)
Start: unspec.
End: unspec.
NISC (USA)
(URL)
NHGRI (USA) (URL)
 252 Organisms on Record.


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