Alpaca
Vicugna pacos

Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 8-2007
End: 12-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Bovine
Bos taurus

Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA) (URL) NHGRI (USA) (URL)
Cat
Felis catus

Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 1-2008
End: 5-2008
WUGSC (USA) (URL) NHGRI (USA) (URL)
Chicken
Gallus gallus

Bird Genome Finished region
Whole Genome Shotgun (6X) Finishing
Start: 8-2006
End: unspec.
Project URL
WUGSC (USA) (URL) USDA (USA) (URL)
NHGRI (USA) (URL)
Chimpanzee
Pan troglodytes

Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: unspec.
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Chimpanzee
Pan troglodytes

Mammal Chr 7, Y Finished
BAC-based Shotgun (or other large clone) Finishing
Start: 6-2004
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Ciliate
Oxytricha trifallax (macronucleus)

Protist Whole chromosomes Draft Assembly,
Comparative-grade finished regions
Whole Chromosome Shotgun (4X)
Start: 11-2004
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Colugo
Cynocephalus variegatus

Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 6-2007
End: 2-2008
WUGSC (USA) (URL) NHGRI (USA) (URL)
Corn
Zea mays B73

Plant Genome Draft Assembly,
Finished region
BAC-based Shotgun (or other large clone) (6X)
Start: 11-2005
End: 10-2008
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
NSF (USA) (URL)
USDOE (USA) (URL)
Joint project with NSF/USDA/DOE. Shotgun sequencing of Mo17 by the Joint Genome Institute.
Dimorphic fungus (Ascomycete)
Blastomyces dermatitidis

Fungus Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 3-2004
End: 5-2007
Project URL
WUGSC (USA) (URL) NIAID (USA) (URL)
Downy Mildew
Hyaloperonospora parasitica Emoy2 strain

Invertebrate Animal Genome Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (8X)
Start: 9-2004
End: 8-2007
WUGSC (USA) (URL) NSF (USA) (URL)
Fruitfly
Drosophila simulans

Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (4X)
Completed
Start: 12-2003
End: 4-2005
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Fruitfly
Drosophila yakuba

Invertebrate Animal Genome Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (8X)
Completed
Start: 12-2003
End: 2-2006
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Histoplasma
Histoplasma capsulatum G186AR

Fungus Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 9-2003
End: 6-2007
Project URL
WUGSC (USA) (URL) NIAID (USA) (URL)
Histoplasma
Histoplasma capsulatum G217B

Fungus Genome BAC-end sequence,
Whole-genome Map,
Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (13X)
Start: 9-2003
End: 6-2007
Project URL
WUGSC (USA) (URL) NIAID (USA) (URL)
Human
Homo sapiens

Mammal Chr 2, 4, 7, Y Finished
BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 4-2003
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Human
Homo sapiens

Mammal Chr 2, 4, 7, Y Other,
Unspecified
Other
Start: 5-2006
End: 12-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Human
Homo sapiens

Mammal Chr 2, 7, 21 SNP discovery
Whole Genome Shotgun (1X)
Start: 7-2003
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Human
Homo sapiens

Mammal All chromosomes - segmental duplications Finished
BAC-based Shotgun (or other large clone) Finishing
Start: unspec.
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Human gut microbiome-100 organisms
Bacteriodetes and Firmicutes

Invertebrate Animal Whole genomes Draft Assembly,
Comparative-grade finished regions
Whole Genome Shotgun (4X) 454 sequence (15X) automated and some manual sequence improvement
Start: 4-2006
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Kissing bug
Rhodnius prolixus

Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X) automated, primer-directed sequence improvement
Start: 11-2005
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Lamprey, Sea
Petromyzon marinus

Fish Genome BAC-end sequence,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6X)
Start: 3-2004
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta

Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: unspec.
End: unspec.
WUGSC (USA) (URL) NHGRI (USA) (URL)
Macaque, Rhesus
Macaca mulatta

Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA) (URL) NHGRI (USA) (URL)
Marmoset, Common
Callithrix jacchus

Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA) (URL) NHGRI (USA) (URL)
Marmoset, Common
Callithrix jacchus

Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 5-2006
End: 4-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Mosquito
Anopheles gambiae M

Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (8X) BAC end sequencing (0.5X)
Start: 6-2006
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Mouse
Mus musculus

Mammal Regions on all chr. excluding 2,4, 11, X Finished region
Whole Genome Shotgun BAC-based Shotgun (or other large clone) Finishing
Completed
Start: 12-2005
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Mouse
Mus musculus

Mammal Chr Y Finished region
BAC-based Shotgun (or other large clone) Whole Genome Shotgun Finishing
Start: 12-2006
End: 12-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Nematode
Caenorhabditis brenneri

Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 1-2005
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Nematode
Caenorhabditis briggsae

Invertebrate Animal Genome Improved Draft
Whole Genome Shotgun
Start: 12-2004
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Nematode
Caenorhabditis elegans

Invertebrate Animal Genome Finished
Whole Genome Shotgun Finishing
Completed
Start: 1-2001
End: unspec.
WUGSC (USA) (URL) NHGRI (USA) (URL)
Nematode
Caenorhabditis japonia

Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 9-2006
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Nematode
Caenorhabditis remanei

Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (9X)
Start: 2-2004
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Nematode
Heterorhabditis bacteriophora

Invertebrate Animal Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 12-2005
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Nematode
Pristionchus pacificus var California

Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (9X)
Start: 8-2004
End: 2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Genome Canada (Canada) (URL)
Opossum
Monodelphis domestica

Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA) (URL) NHGRI (USA) (URL)
Orangutan
Pongo pygmaeus pygmaeus

Mammal Genome Draft Assembly
Whole Genome Shotgun (3X)
Start: 6-2006
End: 2-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Pangolin, Chinese
Manis pentadactyla

Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 7-2007
End: 1-2008
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Planarian
Schmidtea mediterranea

Invertebrate Animal Genome Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (8X)
Start: 11-2003
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Platypus
Ornithorhynchus anatinus

Mammal Genome Draft Assembly
Whole Genome Shotgun (6X)
Completed
Start: 12-2006
End: 4-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Rat
Rattus norvegicus

Mammal Y chromosome Draft Assembly
BAC-based Shotgun (or other large clone)
Start: 5-2007
End: unspec.
WUGSC (USA) (URL) NHGRI (USA) (URL)
Rot (necrotrophic fungus)
Alternaria brassicicola

Fungus Genome BAC-end sequence,
Whole-genome Map,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6.5X) BAC fingerprint map; BAC end sequence (0.5X) ESTs and 454 cDNA
Start: 9-2004
End: 8-2007
Project URL
WUGSC (USA) (URL) USDA (USA) (URL)
NSF (USA) (URL)
Sandfly-Leishmania vector
Phlebotomus papatasi

Invertebrate Animal Genome BAC-end sequence,
Draft Assembly
Whole Genome Shotgun (2X) BAC end sequencing (0.5X) EST and 454 cDNA
Start: 1-2007
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Shrew, Tree
Tupaia belangeri

Mammal Genome Draft Assembly
Whole Genome Shotgun (4X)
Start: 9-2007
End: 3-2008
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Slime mold
Physarum polycephalum

Invertebrate Animal Genome Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (6X)
Start: 1-2005
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Sloth
Choloepus hoffmanni

Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 6-2007
End: 12-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Snail, Freshwater
Biomphalaria glabrata

Invertebrate Animal Genome BAC-end sequence,
Draft Assembly,
Other,
ESTs and 454 cDNA
Whole Genome Shotgun (3X)
Start: 1-2006
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Wellcome Trust (UK) (URL)
The Wellcome Trust Sanger Institute is providing at least 40,000 ESTs for this project.
Tarsier
Tarsius syrichta

Mammal Genome Draft Assembly
Whole Genome Shotgun (2X)
Start: 5-2007
End: 4-2008
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Trichina worm
Trichinella spiralis

Invertebrate Animal Genome BAC-end sequence,
Whole-genome Map,
Draft Assembly,
Other,
ESTs
Whole Genome Shotgun (8X) Automated sequence improvement BAC fingerprint map, BAC end sequences, and ESTs (0.5X)
Start: 1-2005
End: 6-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Yeast
Saccharomyces bayanus

Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Yeast
Saccharomyces castellii

Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Yeast
Saccharomyces kluyveri

Fungus Genome Draft Assembly,
Other,
Automated sequence improvement
Whole Genome Shotgun (10X)
Start: 12-2004
End: 6-2007
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Yeast
Saccharomyces kudriavzevii

Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Yeast
Saccharomyces mikatae

Fungus Genome Draft Assembly
Whole Genome Shotgun
Completed
Start: 1-2003
End: unspec.
Project URL
WUGSC (USA) (URL) NHGRI (USA) (URL)
Zebrafinch
Taeniopygia guttata

Bird Genome Draft Assembly
Whole Genome Shotgun (6X)
Start: 5-2006
End: 10-2007
WUGSC (USA) (URL) NHGRI (USA) (URL)
 56 Organisms on Record.


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